The mini-core collection of Oryza glaberrima accounts for ~16% of O. glaberrima germplasm conserved at the AfricaRice genebank. We characterized the genetic variation and population structure using DArTseq. Overall, O. glaberrima showed very low genetic variation, but clear population structure, primarily by countries of origin, and less so by ecology.
It represents all countries and ecologies of origin, and all groups predicted based on both cluster and population STRUCTURE analyses, proportionally to the size of each cluster.
The mini-core collection may be highly valuable for various purposes, including allele mining and donor parent selection for developing new improved rice germplasm for target traits of interest.
MCPD passport data
MCPD - edb035ac-9e4c-4c99-80e9-8c6a9ec4d4e2.xlsx
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CIV033
• DOI: N/ACIV033
• DOI: N/ACIV033
• DOI: N/ACIV033
• DOI: N/ACIV033
• DOI: N/ACIV033
• DOI: 10.18730/H8CS1CIV033
• DOI: 10.18730/HQGMJCIV033
• DOI: 10.18730/H8CT2CIV033
• DOI: 10.18730/H8CY6CIV033
• DOI: 10.18730/H8D2ACIV033
• DOI: 10.18730/H8D4CCIV033
• DOI: 10.18730/H8D5DCIV033
• DOI: 10.18730/H8DGRCIV033
• DOI: 10.18730/H8DR*CIV033
• DOI: 10.18730/H8E36CIV033
• DOI: 10.18730/H8EADCIV033
• DOI: 10.18730/H8EGKCIV033
• DOI: 10.18730/H8FCACIV033
• DOI: 10.18730/H8H3WCIV033
• DOI: 10.18730/H8HQBCIV033
• DOI: 10.18730/H8J6TCIV033
• DOI: 10.18730/H8JP5CIV033
• DOI: 10.18730/H8JS8CIV033
• DOI: 10.18730/H8K0FCIV033
• DOI: 10.18730/H8MDQCIV033
• DOI: 10.18730/H8N05CIV033
• DOI: 10.18730/H8N8DCIV033
• DOI: 10.18730/H8N9ECIV033
• DOI: 10.18730/H8NAFCIV033
• DOI: 10.18730/SE68FCIV033
• DOI: 10.18730/H8NNTCIV033
• DOI: 10.18730/H8Q3=CIV033
• DOI: 10.18730/H8SA*CIV033
• DOI: 10.18730/H8SZGCIV033
• DOI: 10.18730/H8T2KCIV033
• DOI: 10.18730/H8TJ=CIV033
• DOI: 10.18730/H8TQ3CIV033
• DOI: 10.18730/H8V9NCIV033
• DOI: 10.18730/H8VBQCIV033
• DOI: 10.18730/H8VCRCIV033
• DOI: 10.18730/SE63ACIV033
• DOI: 10.18730/H8VX4CIV033
• DOI: 10.18730/SE0QQCIV033
• DOI: 10.18730/SE0HHCIV033
• DOI: 10.18730/SE0EECIV033
• DOI: 10.18730/H8WHRCIV033
• DOI: 10.18730/H8WJSCIV033
• DOI: 10.18730/H8WMVCIV033
• DOI: 10.18730/H8WPXCIV033
• DOI: 10.18730/H8WY0