Oryza sativa aromatic rice

Aromatic rice is considered a significant commodity in the global market due to its distinctive fragrance and high-quality attributes for both consumption and cooking. It has been reported that the fragrance in rice is controlled by the Badh2 gene located on chromosome 8 (Amarawathi et al. , 2008; Peng et al., 2018). Using the 1k RiCA mid-density genotyping panel for rice (Arbalaez et al., 2019), which includes the DarTSNP marker fgr_1, also known as BADH2.1-7 marker, the Rice Biodiversity Center (RCBA) team conducted the genotyping of 593 Oryza sp. Accessions via the DArTseq-based genotyping by sequencing (GBS) technology. The results allowed them to identify a subset of 15 accessions possessing the fgr gene, which encodes the BADH homolog 2 (badh2). All originating from 12 countries, this RCBA aromatic rice mini collection consists of 5 Oryza sativa japonica subspecies and 13 belonging to indica subspecies.

Crop
rice
Number of accessions
15
FAO WIEWS Institute
Creation date
13 November 2023
Published in Genesys
8 January 2024
Subset metadata

Subset creators


Data collector
Gouda Comlan Arnaud AfricaRice
Data collector
Kpeki Sedjro Bienvenu AfricaRice
Data curator
Marie-Noelle Ndjiondjop Africa Rice Center
Data manager
OGWUIKE Clinton Obinna Africa Rice Center
Data digitizer
Gnikoua Karlin AfricaRice Center

Data and resources


MCPD passport data

MCPD - 9de1a992-acd6-4d33-a398-8e4ce1fce73f.xlsx

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Accessions

List of accessions included in the subset

2. WAB0004811Oryza sativa L. subsp. indica S.Kato • FRX 78F3B-12F4BF5 • Breeding/Research Material • MWI
CIV033 • DOI: 10.18730/H9S4E
3. WAB0006849Oryza sativa L. subsp. indica S.Kato • BASMATI 370 • Advanced/improved cultivar • IND
CIV033 • DOI: 10.18730/HAYW1
4. WAB0007262Oryza sativa L. subsp. japonica S.Kato • WAB492-81-2 • Advanced/improved cultivar • CIV
CIV033 • DOI: 10.18730/HBASC
5. WAB0007739Oryza sativa L. subsp. japonica S.Kato • NERICA 1 • Advanced/improved cultivar • CIV
CIV033 • DOI: 10.18730/SCPTE
6. WAB0008237Oryza sativa L. subsp. indica S.Kato • TOS 740 • Traditional cultivar/Landrace • LKA
CIV033 • DOI: 10.18730/HBXPS
7. WAB0009524Oryza sativa L. subsp. indica S.Kato • TOS 7748 • Traditional cultivar/Landrace • TZA
CIV033 • DOI: 10.18730/HCHY7
8. WAB0014062Oryza sativa L. subsp. indica S.Kato • TOS 15390 • Traditional cultivar/Landrace • BFA
CIV033 • DOI: 10.18730/HE7MQ
9. WAB0016338Oryza sativa L. subsp. indica S.Kato • IR 70418-221-2-3 • Breeding/Research Material • PHL
CIV033 • DOI: 10.18730/HF6XS
10. WAB0019044Oryza sativa L. subsp. indica S.Kato • WAT1214-B • Breeding/Research Material • NGA
CIV033 • DOI: 10.18730/HG7AT
11. WAB0024087Oryza glaberrima Steud. • RAM 98 • Traditional cultivar/Landrace • MLI
CIV033 • DOI: 10.18730/HT8Y*
12. WAB0030284Oryza sativa L. subsp. japonica S.Kato • ORYLUX 6 • Advanced/improved cultivar • TGO
CIV033 • DOI: 10.18730/HKVSG
13. WAB0030291Oryza sativa L. subsp. indica S.Kato • SAHEL 177 • Advanced/improved cultivar • SEN
CIV033 • DOI: 10.18730/HKVVJ
14. WAB0030292Oryza sativa L. subsp. indica S.Kato • SAHEL 208 • Advanced/improved cultivar • SEN
CIV033 • DOI: 10.18730/HKVWK
15. WAB0032721Oryza sativa L. subsp. indica S.Kato • CT 18232-5-9-1-2-5-1 • Breeding/Research Material • COL
CIV033 • DOI: 10.18730/HNCNT