Oryza sativa and Oryza glaberrima tolerant to salinity stress during germination

Soil salinity is a major environmental stressor, affecting approximately 20% of arable land and nearly half of irrigated land globally (Fahad et al., 2019; Dramalis et al., 2021). It negatively impacts rice growth, yield, and nutrient content, leading to ion imbalances that degrade rice quality (Rao et al., 2013). To identify salinity-tolerant rice accessions, the Rice Biodiversity Center for Africa (RBCA) screened 530 Oryza sativa and 300 Oryza glaberrima accessions in laboratory condition. The first stage involved germinating 100 seeds per accession in a NaCl solution at 6 dSm⁻¹ after breaking dormancy. From this, 144 high-germination accessions (99%) were selected, including 22 O. glaberrima and 122 O. sativa. In the second stage, these accessions were evaluated with NaCl concentrations of 0, 6, 8, 10, and 12 dSm⁻¹, leading to the identification of 10 O. sativa and 4 O. glaberrima accessions as salinity-tolerant at the seedling stage.

Type of subset
Representative
Method of selection
exposure to salinity stress during germination
Crop
rice
Number of accessions
13
FAO WIEWS Institute
Creation date
July 22 2024
Source
Genotyped by Intertek Lab using DArTseq SNP markers
Published in Genesys
21 October 2024
Subset metadata

Subset creators


Data collector
Arnaud Gouda Africa Rice Center
Data manager
Clinton Ogwuike Africa Rice Center
Data curator
Marie-Noelle Ndjiondjop Africa Rice Center

Data and resources


MCPD passport data

MCPD - 9f356323-5909-4e63-ab38-94d61302853d.xlsx

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Accessions

List of accessions included in the subset

2. WAB0013554Oryza sativa L. subsp. indica S.Kato • TOS 14664 • Traditional cultivar/Landrace • MLI
CIV033 • DOI: 10.18730/HE2C3
3. WAB0020631Oryza glaberrima Steud. • TOG 9030 • Traditional cultivar/Landrace • NGA
CIV033 • DOI: 10.18730/SDNBX
4. WAB0021768Oryza glaberrima Steud. • TOG 12010 • Traditional cultivar/Landrace • NGA
CIV033 • DOI: 10.18730/HH67G
5. WAB0024721Oryza sativa L. subsp. indica S.Kato • PCT-6\\0\\0\\0> 19-1-4-3-1-1-1-5-5 • Breeding/Research Material • COL
CIV033 • DOI: 10.18730/HHSZK
6. WAB0024919Oryza sativa L. subsp. indica S.Kato • TOS 6136 • Traditional cultivar/Landrace • NGA
CIV033 • DOI: 10.18730/HR8ZM
7. WAB0025854Oryza sativa L. subsp. indica S.Kato • TOS 15539 • Traditional cultivar/Landrace • BFA
CIV033 • DOI: 10.18730/HJKHQ
8. WAB0026012Oryza sativa L. subsp. indica S.Kato • TOS 5847 • Traditional cultivar/Landrace • LBR
CIV033 • DOI: 10.18730/HQHZR
9. WAB0029321Oryza glaberrima Steud. • TOG 5386 • Traditional cultivar/Landrace • NGA
CIV033 • DOI: 10.18730/HKGPZ
10. WAB0029407Oryza glaberrima Steud. • TOG 7388 • Traditional cultivar/Landrace • NGA
CIV033 • DOI: 10.18730/HKJRQ
11. WAB0033400Oryza sativa L. subsp. indica S.Kato • CC 5 • Traditional cultivar/Landrace • BFA
CIV033 • DOI: 10.18730/HNX1*
12. WAB0035169Oryza sativa L. subsp. indica S.Kato • Konyi a kontofii 2 • Traditional cultivar/Landrace • GIN
CIV033 • DOI: 10.18730/HPY3H
13. WAB0037295Oryza sativa L. subsp. indica S.Kato • BDI14-121 • Traditional cultivar/Landrace • BDI
CIV033 • DOI: 10.18730/SCFVD