Medicago truncatula inner core collection

An inner core of 61 accessions of Medicago truncatula was developed by Ellwood (2006) from the broader 232 accession core for this species developed by Skinner et al (1999a,b). Although the inner core was developed from just six simple sequence repeat (SSR) loci (an adequate method at the time of publishing), it has been used with success by breeders of annual medics looking for diversity in new traits (D. Peck Pers. Com 2023). The inner core should be considered in combination with the larger core developed by Skinner et al (1999a,b).

Ellwood et al (2006) showed the collection to be highly diverse, exhibiting an average of 25 SSR alleles per locus, with over 90% of individuals showing discrete genotypes. The rich diversity of the SARDI collection provides an invaluable resource for studying natural allelic variation of M. truncatula. To efficiently exploit the variation in the SARDI collection, a subset of accessions (n=61) was defined that maximises the diversity. The APG has 58 accessions identified as the inner core, which are available for order.

References:

Skinner, D.Z., Bauchan, G.R., Auricht, G., Hughes, S. (1999a) In “Core collections for today and tomorrow”, Eds. Johnson, R.C. and T. Hodgkin. International Plant Genetic Resources Institute, Rome, Italy.
Skinner, D.Z., Bauchan, G.R., Auricht, G., Hughes, S. (1999b) A Method for the Efficient Management and Utilization of Large Germplasm Collections. Crop Science, 39, 4 1237-1242.
Ellwood, S.R., D’Souza, N.K., Kamphuis, L.G. Burgess, T.I. Nair, R.M., Oliver, R.P. (2006) SSR analysis of the Medicago truncatula SARDI core collection reveals substantial diversity and unusual genotype dispersal throughout the Mediterranean basin, Theoretical and Applied Genetics, 112, 5, 977-983.

Type of subset
Representative
Method of selection
Molecular diversity
Crop
forages
Number of accessions
58
FAO WIEWS Institute
Creation date
2005
Published in Genesys
2 March 2023
Subset metadata

Subset creators


Data manager
Alan Humphries, Curator Australian Pastures Genebank South Australian Research and Development Institute

Data and resources


MCPD passport data

MCPD - bc352749-e9ac-442b-b1fa-3d17b9ee742b.xlsx

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Accessions

List of accessions included in the subset

2. APG 1316Medicago truncatula GAERTN. • CPI 35909 • Wild • DNK
AUS167 • DOI: 10.18730/13XNZD
3. APG 1502Medicago truncatula GAERTN. • EXSA 697 • Wild • ISR
AUS167 • DOI: 10.18730/13XVSE
4. APG 2168Medicago truncatula GAERTN. • CPI 116332 • Wild • ITA
AUS167 • DOI: 10.18730/13YGKE
5. APG 2193Medicago truncatula GAERTN. • CPI 116356 • Wild • ITA
AUS167 • DOI: 10.18730/13YHC2
6. APG 2203Medicago truncatula GAERTN. • CPI 116366 • Wild • ITA
AUS167 • DOI: 10.18730/13YHPC
7. APG 2204Medicago truncatula GAERTN. • CPI 116367 • Wild • ITA
AUS167 • DOI: 10.18730/13YHQD
8. APG 2840Medicago truncatula GAERTN. • CPI 44621 • Wild • CYP
AUS167 • DOI: 10.18730/13Z5KM
9. APG 3047Medicago truncatula GAERTN. • CPI 44588 • Wild • PRT
AUS167 • DOI: 10.18730/13ZC25
10. APG 3054Medicago truncatula GAERTN. • CPI 116410 • Wild • GRC
AUS167 • DOI: 10.18730/13ZC9C
11. APG 3116Medicago truncatula GAERTN. • CPI 45013 • Wild • ISR
AUS167 • DOI: 10.18730/13ZE70
AUS167 • DOI: 10.18730/13ZHY8
13. APG 3562Medicago truncatula GAERTN. • SA 3562 • Wild • FRA
AUS167 • DOI: 10.18730/13ZW52
14. APG 3916Medicago truncatula GAERTN. • EXSA 3052 • Wild • GRC
AUS167 • DOI: 10.18730/14077Q
15. APG 4087Medicago truncatula GAERTN. • CPI 49612 • Wild • TUN
AUS167 • DOI: 10.18730/140CJ9
16. APG 6088Medicago truncatula GAERTN. • EXSA 4581 • Wild • PRT
AUS167 • DOI: 10.18730/142B3C
17. APG 7749Medicago truncatula GAERTN. • EXSA 7521 • Wild • TUN
AUS167 • DOI: 10.18730/143Z08
18. APG 8105Medicago truncatula GAERTN. • CPI 64308 • Wild • USA
AUS167 • DOI: 10.18730/144A4Z
19. APG 8454Medicago truncatula GAERTN. • CPI 63976 • Wild • LBY
AUS167 • DOI: 10.18730/144N1A
20. APG 8496Medicago truncatula GAERTN. • EXSA 7867 • Wild • TUN
AUS167 • DOI: 10.18730/144PBF
21. APG 8601Medicago truncatula GAERTN. • 43 MT • Wild • DZA
AUS167 • DOI: 10.18730/144SM9
22. APG 8625Medicago truncatula GAERTN. • CPI 65265 • Wild • MAR
AUS167 • DOI: 10.18730/144TC~
23. APG 8626Medicago truncatula GAERTN. • CPI 65241 • Wild • MAR
AUS167 • DOI: 10.18730/144TD$
24. APG 8642Medicago truncatula GAERTN. • CPI 65274 • Wild • MAR
AUS167 • DOI: 10.18730/144TXD
25. APG 8916Medicago truncatula GAERTN. • EXSA 8601 • Wild • DZA
AUS167 • DOI: 10.18730/1453FW
26. APG 8935Medicago truncatula GAERTN. • EXSA 8493 • Wild • TUN
AUS167 • DOI: 10.18730/14542A
27. APG 9356Medicago truncatula GAERTN. • SA 9356 • Wild • DZA
AUS167 • DOI: 10.18730/145H7R
28. APG 9357Medicago truncatula GAERTN. • SA 9357 • Wild • DZA
AUS167 • DOI: 10.18730/145H8S
29. APG 9456Medicago truncatula GAERTN. • SA 9456 • Wild • TUN
AUS167 • DOI: 10.18730/145MBD
30. APG 9596Medicago truncatula GAERTN. • EXSA 9521 • Wild • TUN
AUS167 • DOI: 10.18730/145RQ5
31. APG 9700Medicago truncatula GAERTN. • EXSA 9439 • Wild • TUN
AUS167 • DOI: 10.18730/145VZ=
32. APG 9728Medicago truncatula GAERTN. • EXSA 9457 • Wild • TUN
AUS167 • DOI: 10.18730/145WVT
33. APG 9866Medicago truncatula GAERTN. • EXSA 9356 • Wild • DZA
AUS167 • DOI: 10.18730/14615G
34. APG 9876Medicago truncatula GAERTN. • EXSA 9371 • Wild • DZA
AUS167 • DOI: 10.18730/1461FT
35. APG 10406Medicago truncatula GAERTN. • CPI 65265 • Wild • MAR
AUS167 • DOI: 10.18730/146J11
36. APG 10481Medicago truncatula GAERTN. • SA 10481 • Wild • TUN
AUS167 • DOI: 10.18730/146MC2
AUS167 • DOI: 10.18730/1482J0
38. APG 15268Medicago truncatula GAERTN. • EXSA 14828 • Wild • DZA
AUS167 • DOI: 10.18730/14B9ZG
39. APG 15951Medicago truncatula GAERTN. • CPI 116730 • Wild • PRT
AUS167 • DOI: 10.18730/14BZA~
40. APG 17590Medicago truncatula GAERTN. • CPI 89584 • Wild • ISR
AUS167 • DOI: 10.18730/14DJH7
41. APG 18532Medicago truncatula GAERTN. • CPI 117015 • Wild • TUN
AUS167 • DOI: 10.18730/14EFZR
42. APG 21362Medicago truncatula GAERTN. • CPI 102973 • Wild • LBY
AUS167 • DOI: 10.18730/14H8D5
43. APG 23859Medicago truncatula GAERTN. • EXSA 4084 • Wild • TUN
AUS167 • DOI: 10.18730/14KPEQ
44. APG 24576Medicago truncatula GAERTN. • SA 24576 • Wild • MAR
AUS167 • DOI: 10.18730/14MCV0
45. APG 24714Medicago truncatula GAERTN. • CPI 124415 • Wild • ITA
AUS167 • DOI: 10.18730/14MH5V
46. APG 24968Medicago truncatula GAERTN. • EXSA 24136 • Wild • ITA
AUS167 • DOI: 10.18730/14MS3P
47. APG 25898Medicago truncatula GAERTN. • CPI 128310 • Wild • ITA
AUS167 • DOI: 10.18730/14NP5V
48. APG 25915Medicago truncatula GAERTN. • CPI 128324 • Wild • ITA
AUS167 • DOI: 10.18730/14NPP7
49. APG 25941Medicago truncatula GAERTN. • CPI 128350 • Wild • ITA
AUS167 • DOI: 10.18730/14NQG~
50. APG 27062Medicago truncatula GAERTN. • CPI 129351 • Wild • GRC
AUS167 • DOI: 10.18730/14PTH7