Shared pedigree relationships and transmission of unreduced gametes in cultivated banana

Cultivars have low fertility and are vegetatively propagated, forming groups of somaclones. Relatively few of them, mainly triploids, are grown on a large scale and characterization of their parental relationships may be useful for breeding strategies. Here we investigate parental relationships and gamete-type contributions among diploid and polyploid banana cultivars. We used SNP genotyping data from whole-genome sequencing of 178 banana individuals, including 111 cultivars, 55 wild bananas and 12 synthetic F1 hybrids. We analysed the proportion of SNP sites in accordance with direct parentage with a global statistic and along chromosomes for selected individuals.

Crop
Banana
Number of accessions
34
Creation date
21 December 2023
Published in Genesys
8 January 2024
Subset metadata

Subset creators


Data manager
Nabila Yahiaoui CIRAD, UMR AGAP Institut, Montpellier F-34398, France, UMR AGAP Institut, Université Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France

Data and resources


MCPD passport data

MCPD - c55caae5-d6a6-4291-8145-c0a132986f35.xlsx

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Accessions

List of accessions included in the subset

2. ITC0078Musa aaa • Wh-o-gu • Traditional cultivar/Landrace • PNG
BEL084 • DOI: 10.18730/9J96T
3. ITC0415Musa acuminata Colla • Pisang Cici Alas • Wild • IDN
BEL084 • DOI: 10.18730/9JX5U
4. ITC0434Musa aa • Racadag • Traditional cultivar/Landrace • PHL
BEL084 • DOI: 10.18730/9JXYR
6. ITC0568Musa aa • Malaysian Blood • Traditional cultivar/Landrace
BEL084 • DOI: 10.18730/9K6E0
7. ITC0589Musa aa • Gulum • Traditional cultivar/Landrace • PNG
BEL084 • DOI: N/A
8. ITC0599Musa schizocarpa N. W. Simmonds • Schizocarpa • Wild • PNG
BEL084 • DOI: 10.18730/9K8AQ
10. ITC0778Musa aa • Gorop • Traditional cultivar/Landrace • PNG
BEL084 • DOI: 10.18730/9KHEK
11. ITC0785Musa aa • Aivip • Traditional cultivar/Landrace • PNG
BEL084 • DOI: 10.18730/9KHW~
12. ITC0786Musa aa • Katual no.2 • Traditional cultivar/Landrace • PNG
BEL084 • DOI: 10.18730/9KHY=
13. ITC0810Musa aa • Sihir • Traditional cultivar/Landrace • PNG
BEL084 • DOI: 10.18730/9KKTN
14. ITC0822Musa as • Tonton Kepa • Traditional cultivar/Landrace • PNG
BEL084 • DOI: 10.18730/9KMQD
15. ITC0885Musa acuminata subsp. banksii N. W. Simmonds • Musa acuminata ssp. banksii • Wild • PNG
BEL084 • DOI: 10.18730/9KS46
16. ITC0897Musa acuminata subsp. banksii N. W. Simmonds • Musa acuminata ssp. banksii • Wild • PNG
BEL084 • DOI: 10.18730/9KTC9
17. ITC0917Musa peekelii subsp. peekelii • Musa peekelii ssp. peekelii • Wild • PNG
BEL084 • DOI: 10.18730/9KVMC
18. ITC0926Musa schizocarpa N. W. Simmonds • Schizocarpa • Wild • PNG
BEL084 • DOI: 10.18730/9KW4W
19. ITC0946Musa aaa • Merik • Traditional cultivar/Landrace • PNG
BEL084 • DOI: 10.18730/9KXK1
20. ITC0956Musa lolodensis Cheesman • Musa lolodensis • Wild • PNG
BEL084 • DOI: 10.18730/9KYEW
21. ITC0996Musa aa • Manameg Red • Traditional cultivar/Landrace • PNG
BEL084 • DOI: 10.18730/9M0GM
22. ITC1013Musa aa • Sena • Traditional cultivar/Landrace • PNG
BEL084 • DOI: 10.18730/9M1BA
23. ITC1028Musa acuminata Colla • Agutay • Wild
BEL084 • DOI: 10.18730/9M2C6
24. ITC1031Musa aa • Veinte Cohol • Traditional cultivar/Landrace
BEL084 • DOI: 10.18730/9M2E8
25. ITC1187Musa aa • Tomolo • Traditional cultivar/Landrace • PNG
BEL084 • DOI: 10.18730/9M9FB
26. ITC1206Musa aa • Spiral • Traditional cultivar/Landrace • PNG
BEL084 • DOI: 10.18730/9MAWK
27. ITC1211Musa aa • Vudu Beo • Traditional cultivar/Landrace • PNG
BEL084 • DOI: 10.18730/9MB8Z
28. ITC1245Musa aa • Papat • Traditional cultivar/Landrace • PNG
BEL084 • DOI: 10.18730/9MDCS
BEL084 • DOI: 10.18730/9MM0F
BEL084 • DOI: 10.18730/9MM3J
BEL084 • DOI: 10.18730/9MM5M
33. ITC1701Musa acuminata Colla • Musa acuminata sp.sumatrana • Wild • IDN
BEL084 • DOI: 10.18730/9NDDE
34. ITC1704Musa sp. • Kole • Other
BEL084 • DOI: 10.18730/9NDMN