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Chromosome Segment Substitution Lines (CSSLs)

Chromosome segment substitution lines (CSSLs) are genetic stocks representing the complete genome of any genotype in the background of a cultivar as overlapping segments. When a chromosome of a line is replaced by the chromosome of another line, one obtains chromosome substitution lines (CSLs). CSLs can be very powerful tools for the detection and precise mapping of quantitative trait loci (QTLs).

This subset includes CSSL of O. glaberrima backcrossed into Caiapo and CSSL of O. rufipogon backcrossed into Curinga. They were all received from CIAT, Colombia in 2013.

Crop

Rice

Number of accessions

140

FAO WIEWS Institute

International Rice Research Institute

Creation date

18 December 2023

Published in Genesys

8 January 2024

Subset metadata

Subset creators

Data curator

Grace Lee S. Capilit International Rice Research Institute

Data and resources

MCPD passport data

MCPD - 6e4db430-1398-4e9a-ae6d-26eda4f1ec00.xlsx

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Accessions

List of accessions included in the subset

1. IRGC 126812 • Oryza sativa Linnaeus • CT 16307 (1)-CA-4-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54AX9

2. IRGC 126813 • Oryza sativa Linnaeus • CT 16307-CA-19-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54AYA

3. IRGC 126814 • Oryza sativa Linnaeus • CT 16308-CA-2-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54AZB

4. IRGC 126815 • Oryza sativa Linnaeus • CT 16308-CA-5-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54B0C

5. IRGC 126816 • Oryza sativa Linnaeus • CT 16310 (2)-CA-5-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54B1D

6. IRGC 126817 • Oryza sativa Linnaeus • CT 16312 (2)-CA-6-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54B2E

7. IRGC 126818 • Oryza sativa Linnaeus • CT 16313-CA-10-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54B3F

8. IRGC 126819 • Oryza sativa Linnaeus • CT 16313-CA-17-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54B4G

9. IRGC 126820 • Oryza sativa Linnaeus • CT 16319-CA-11-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54B5H

10. IRGC 126821 • Oryza sativa Linnaeus • CT 16319-CA-12-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54B6J

11. IRGC 126822 • Oryza sativa Linnaeus • CT 16322-CA-7-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54B7K

12. IRGC 126823 • Oryza sativa Linnaeus • CT 16323-CA-11-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54B8M

13. IRGC 126824 • Oryza sativa Linnaeus • CT 16323-CA-4-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54B9N

14. IRGC 126825 • Oryza sativa Linnaeus • CT 16325-CA-2-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54BAP

15. IRGC 126826 • Oryza sativa Linnaeus • CT 16327-CA-22-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54BBQ

16. IRGC 126827 • Oryza sativa Linnaeus • CT 16328-CA-10-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54BCR

17. IRGC 126828 • Oryza sativa Linnaeus • CT 16328-CA-12-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54BDS

18. IRGC 126829 • Oryza sativa Linnaeus • CT 16328-CA-7-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54BET

19. IRGC 126830 • Oryza sativa Linnaeus • CT 16329-CA-10-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54BFV

20. IRGC 126831 • Oryza sativa Linnaeus • CT 16329-CA-3-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54BGW

21. IRGC 126832 • Oryza sativa Linnaeus • CT 16329-CA-5-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54BHX

22. IRGC 126833 • Oryza sativa Linnaeus • CT 16330 (1)-CA-10-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54BJY

23. IRGC 126834 • Oryza sativa Linnaeus • CT 16330 (1)-CA-12-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54BKZ

24. IRGC 126835 • Oryza sativa Linnaeus • CT 16330 (1)-CA-2-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54BM*

25. IRGC 126836 • Oryza sativa Linnaeus • CT 16330 (1)-CA-5-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54BN~

26. IRGC 126837 • Oryza sativa Linnaeus • CT 16333 (1)-CA-18-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54BP$

27. IRGC 126838 • Oryza sativa Linnaeus • CT 16333 (1)-CA-1-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54BQ=

28. IRGC 126839 • Oryza sativa Linnaeus • CT 16333 (2)-CA-15-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54BRU

29. IRGC 126840 • Oryza sativa Linnaeus • CT 16334 (2)-CA-2-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54BS0

30. IRGC 126841 • Oryza sativa Linnaeus • CT 16334 (2)-CA-4-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54BT1

31. IRGC 126842 • Oryza sativa Linnaeus • CT 16337-CA-10-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54BV2

32. IRGC 126843 • Oryza sativa Linnaeus • CT 16337-CA-13-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54BW3

33. IRGC 126844 • Oryza sativa Linnaeus • CT 16337-CA-3-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54BX4

34. IRGC 126845 • Oryza sativa Linnaeus • CT 16337-CA-9-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54BY5

35. IRGC 126846 • Oryza sativa Linnaeus • CT 16338-CA-29-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54BZ6

36. IRGC 126847 • Oryza sativa Linnaeus • CT 16338-CA-2-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54C07

37. IRGC 126848 • Oryza sativa Linnaeus • CT 16340-CA-13-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54C18

38. IRGC 126849 • Oryza sativa Linnaeus • CT 16340-CA-4-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54C29

39. IRGC 126850 • Oryza sativa Linnaeus • CT 16341-CA-4-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54C3A

40. IRGC 126851 • Oryza sativa Linnaeus • CT 16341-CA-8-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54C4B

41. IRGC 126852 • Oryza sativa Linnaeus • CT 16341-CA-9-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54C5C

42. IRGC 126853 • Oryza sativa Linnaeus • CT 16342-CA-18-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54C6D

43. IRGC 126854 • Oryza sativa Linnaeus • CT 16342-CA-24-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54C7E

44. IRGC 126855 • Oryza sativa Linnaeus • CT 16342-CA-5-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54C8F

45. IRGC 126856 • Oryza sativa Linnaeus • CT 16344-CA-20-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54C9G

46. IRGC 126857 • Oryza sativa Linnaeus • CT 16345-CA-8-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54CAH

47. IRGC 126858 • Oryza sativa Linnaeus • CT 16346-CA-11-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54CBJ

48. IRGC 126859 • Oryza sativa Linnaeus • CT 16346-CA-12-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54CCK

49. IRGC 126860 • Oryza sativa Linnaeus • CT 16346-CA-14-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54CDM

50. IRGC 126861 • Oryza sativa Linnaeus • CT 16346-CA-20-M-1M • Genetic stock • COL

PHL001 • DOI: 10.18730/54CEN