AFLP Analysis of Gene Pools of a Wild Bean Core Collection

The study used amplified fragment length polymorphism (AFLP) analysis to evaluate the genetic structure of a core collection of wild Phaseolus vulgaris L. AFLP is a powerful technique for detecting genetic variation, and it has been used to study the genetic diversity of a wide range of plant species.

The study found that wild Phaseolus vulgaris can be divided into four major gene pools: Mesoamerica, Colombia, the northern Andes of Ecuador and northern Peru, and the southern Andes. However, the separation among gene pools was not wide, suggesting that there has been some gene flow between them.

The study also found that there is significant genetic diversity within each gene pool. This diversity is important because it provides a pool of genetic resources that can be used to improve the cultivated common bean.

The study's findings have several important implications. First, they suggest that AFLP analysis is a useful tool for studying the genetic diversity of wild Phaseolus vulgaris. Second, they show that wild Phaseolus vulgaris is divided into four major gene pools, but that there is also significant genetic diversity within each gene pool. Third, they suggest that wild Phaseolus vulgaris is a valuable source of genetic resources for improving the cultivated common bean.

The study's findings could be used to develop new breeding strategies for the common bean. For example, breeders could use the information on genetic diversity to identify wild accessions that have desirable traits, such as resistance to pests and diseases. Breeders could then cross these wild accessions with cultivated varieties to produce new varieties with improved traits.

Overall, the study provides valuable information on the genetic diversity of wild Phaseolus vulgaris. This information could be used to develop new breeding strategies for the common bean.

Crop
beans
Number of accessions
105
Creation date
September 1, 1996
Published in Genesys
October 18, 2023
Subset metadata

Subset creators


Not specified
Joe Tohme Biotechnology Research Unit, CIAT
Not specified
D. Orlando Gonzalez Biotechnology Research Unit, CIAT
Data curator
Steve Beebe Bean Program, CIAT
Not specified
Myriam C. Duque Biometry Unit, CIAT

Data and resources


MCPD passport data

MCPD - b548570b-00f9-4075-a224-b10e73c8f2a1.xlsx

Apply custom filters to accessions in this subset

Explore subset accessions on the map

Accessions

List of accessions included in the subset

2. G10000 • Phaseolus vulgaris • FRIJOL DE RATON • Weedy • Mexico
COL003 • DOI: 10.18730/PMPY1
3. G10002 • Phaseolus vulgaris • Wild • Mexico
COL003 • DOI: 10.18730/PGDMA
4. G10019 • Phaseolus vulgaris • Wild • Mexico
COL003 • DOI: 10.18730/PGDVH
5. G10019A • Phaseolus vulgaris • Wild • Mexico
COL003 • DOI: 10.18730/S385Q
6. G10022 • Phaseolus vulgaris • Wild • Mexico
COL003 • DOI: 10.18730/JRH59
7. G10023 • Phaseolus vulgaris • Wild • Mexico
COL003 • DOI: 10.18730/JHPPB
8. G11034 • Phaseolus vulgaris • Wild • Mexico
COL003 • DOI: 10.18730/JP8XW
9. G11050 • Phaseolus vulgaris • Wild • Mexico
COL003 • DOI: 10.18730/PGE0P
10. G11051 • Phaseolus vulgaris • Wild • Mexico
COL003 • DOI: 10.18730/JP9XQ
11. G11053 • Phaseolus vulgaris • Wild • Mexico
COL003 • DOI: 10.18730/JP9WP
12. G11054 • Phaseolus vulgaris • Weedy • Mexico
COL003 • DOI: 10.18730/PG5MD
13. G12851 • Phaseolus vulgaris • Wild • Guatemala
COL003 • DOI: 10.18730/JM8ZH
14. G12852 • Phaseolus vulgaris • Wild • El Salvador
COL003 • DOI: 10.18730/PGE2R
15. G12856 • Phaseolus vulgaris • Wild • Peru
COL003 • DOI: 10.18730/PGE4T
16. G12865 • Phaseolus vulgaris • Wild • Mexico
COL003 • DOI: 10.18730/JHA6J
17. G12867 • Phaseolus vulgaris • FRIJOLILLO • Wild • Mexico
COL003 • DOI: 10.18730/PGE9Z
18. G12869 • Phaseolus vulgaris • DE COYOTE • Wild • Mexico
COL003 • DOI: 10.18730/PGEA*
19. G12871 • Phaseolus vulgaris • FRIJOL DE RATON • Wild • Mexico
COL003 • DOI: 10.18730/JHBRZ
20. G12875 • Phaseolus vulgaris • CHANECA • Wild • Mexico
COL003 • DOI: 10.18730/JMJX2
21. G12879 • Phaseolus vulgaris • Wild • Mexico
COL003 • DOI: 10.18730/PGEEU
22. G12879A • Phaseolus vulgaris • Wild • Mexico
COL003 • DOI: 10.18730/S4QPV
23. G12889 • Phaseolus vulgaris • DE COYOTE • Wild • Mexico
COL003 • DOI: 10.18730/JNDK5
24. G12893 • Phaseolus vulgaris • Wild • Mexico
COL003 • DOI: 10.18730/JNDSB
25. G12922 • Phaseolus vulgaris • COYOTE • Weedy • Mexico
COL003 • DOI: 10.18730/PG5WN
26. G12922A • Phaseolus vulgaris • COYOTE • Weedy • Mexico
COL003 • DOI: 10.18730/S12TR
27. G12947 • Phaseolus vulgaris • Wild • Mexico
COL003 • DOI: 10.18730/PGEQ8
28. G12949 • Phaseolus vulgaris • Wild • Mexico
COL003 • DOI: 10.18730/PGER9
29. G13021 • Phaseolus vulgaris • Wild • Mexico
COL003 • DOI: 10.18730/JKVY7
30. G19026 • Phaseolus vulgaris • PINTO • Traditional cultivar/Landrace • Mexico
COL003 • DOI: 10.18730/PEV2M
31. G19026C • Phaseolus vulgaris • PINTO • Weedy • Mexico
COL003 • DOI: 10.18730/S11HM
32. G19889 • Phaseolus vulgaris • Wild • Argentina
COL003 • DOI: 10.18730/JTK3A
33. G19890 • Phaseolus vulgaris • Wild • Argentina
COL003 • DOI: 10.18730/JTKAH
34. G19892 • Phaseolus vulgaris • Wild • Argentina
COL003 • DOI: 10.18730/JTK4B
35. G19893 • Phaseolus vulgaris • CHAUCHA DE CAMPO • Wild • Argentina
COL003 • DOI: 10.18730/JTK5C
36. G19895 • Phaseolus vulgaris • Wild • Argentina
COL003 • DOI: 10.18730/JTK7E
37. G19897 • Phaseolus vulgaris • Wild • Argentina
COL003 • DOI: 10.18730/JTK9G
38. G19901 • Phaseolus vulgaris • SACHA POROTO • Wild • Argentina
COL003 • DOI: 10.18730/JTKCK
39. G19906 • Phaseolus vulgaris • Wild • Guatemala
COL003 • DOI: 10.18730/PGBQQ
40. G19908 • Phaseolus vulgaris • Wild • Guatemala
COL003 • DOI: 10.18730/JVYX6
41. G19909 • Phaseolus vulgaris • Wild • Guatemala
COL003 • DOI: 10.18730/JVZ3C
42. G21117 • Phaseolus vulgaris • Wild • Colombia
COL003 • DOI: 10.18730/JTEE9
43. G21197 • Phaseolus vulgaris • Wild • Argentina
COL003 • DOI: 10.18730/JW9YT
44. G21245 • Phaseolus debouckii • Wild • Peru
COL003 • DOI: 10.18730/PGBRR
45. G22303 • Phaseolus vulgaris • Wild • Colombia
COL003 • DOI: 10.18730/JW1QP
46. G22837 • Phaseolus vulgaris • Wild • Mexico
COL003 • DOI: 10.18730/JWG0=
47. G23416 • Phaseolus vulgaris • Wild • Costa Rica
COL003 • DOI: 10.18730/JW9C8
48. G23419A • Phaseolus vulgaris • Wild • Peru
COL003 • DOI: 10.18730/S1BPC
49. G23421 • Phaseolus vulgaris • PICHUPA NUMIA • Wild • Peru
COL003 • DOI: 10.18730/PGBVV
50. G23422 • Phaseolus vulgaris • Wild • Peru
COL003 • DOI: 10.18730/JX0A2