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Metabolic profile of sweet potato leaves and roots

2019

A preliminary characterization of metabolic profile of sweet potato roots and leaves is important to identify compounds associate with nutritional value. Drapal et al 2019 described a metabolic profile of 27 cultivars of sweet potato including landraces and improved varieties.

A total of 130 metabolites were identified in leaf and storage root tissues harvested from 9-month-old plants grown at greenhouse conditions, four repetitions each. A third of all identified compounds were classified as part of the phenylpropanoid metabolism, while the other metabolites within the following metabolic groups: amino acids, sugars, tri-carboxyl acid cycle, sterols, membrane precursors and isoprenoids (Isopentenyl pyrophosphate-IPP derived). Different quantification methods were used ultra-high-performance liquid chromatography (UPLC), liquid chromatography-mass spectrometry (LC-MS), gas chromatography-mass spectrometry (GC-MS), and near-infrared reflectance spectroscopy (NIRS).

A set of 23 accessions in this study are available for distribution at the International Potato Center Genebank. A selection of 47 metabolites and their concentration (µg/g of dry weigh – DW) in leaves and/or roots is presented in this dataset. Mainly amino acids (Alanine, Arginine, Asparagine, Aspartic acid, γ-Amino butyric acid, Glutamic acid, Glycine, Histidine, Isoleucine, Leucine, Phenylalanine, Proline, Tryptophan, and Tyrosine), cell wall or membrane precursors (α-linolenic acid, Erythronic acid/Threonic acid, Gluconic acid, Linoleic acid, Palmitic acid, and Stearic acid), isoprenoids (Abscisic acid, α-Tocopherol, β-Carotene, γ-Tocopherol, Lutein, and Phytoene), phenolics (Caffeic acid, Cinnamic acid, Kaempferol-3-O-rutinoside, Kaempferol-3-O-rutinoside_1, o-Coumaric acid, Quercetin-glucoside malic acid, and trans-Caffeic acid), sugars (Fructose, Glucose, Glucose/Mannose/Galactose/Sorbose, Inositol, Mannose, and Sucrose), and tri- carboxyl acid cycle compounds (Citric acid, Fumaric acid, Isocitric acid, Maleic acid, and Malic acid).

Paper reference: Drapal, M., Rossel, G., Heider, B. et al. Metabolic diversity in sweet potato (Ipomoea batatas, Lam.) leaves and storage roots. Hortic Res 6, 2 (2019) 10.1038/s41438-018-0075-5

Partner

CIP International Potato Center

Crop name

sweetpotato

Number of accessions

Number of traits

Start of evaluation

Date not provided

End of evaluation

Date not provided

Dataset metadata

Dataset creators

Data manager

Margit Drapal Biological Sciences, Royal Holloway University of London

Data curator

Genoveva Rossel International Potato Center (CIP)

Data manager

Bettina Heider International Potato Center (CIP)

Data manager

Paul D. Fraser Biological Sciences, Royal Holloway University of London

Dataset use and licensing

Licensed under

CC BY-NC 4.0 Attribution-NonCommercial 4.0 International

More information

https://creativecommons.org/licenses/by-nc/4.0/

Data and resources

Dataset file

Drapal et al 2019_dataset_genebank.xlsx

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Dataset file

Drapal et al _description_compound_selected_genebank.xlsx

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Dataset metadata

Metadata.xlsx

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Disclaimer

Disclaimer.txt

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MCPD passport data

MCPD - 9c820d21-717b-4343-8f73-219825d4e943.xlsx

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Data provider contact information

Address

Lima, Peru

Other Metadata

Date of dataset

2019

Related resources

https://doi.org/10.1038/s41438-018-0075-5

Metadata create date

December 20, 2019

Metadata updated date

October 1, 2025

Published in Genesys

January 6, 2020

Traits observed

Leaf Caffeic acid µg/g DW

Compound of Caffeic acid and metabolite group of Phenolic and quantification method of LCMS

Leaf Abscisic acid µg/g DW

Compound of Abscisic acid and metabolite group of Isopentenyl pyrophosphate and quantification method of LCMS

Leaf Glucose/Mannose/Galactose/Sorbose µg/g DW

Compound of Glucose/Mannose/Galactose/Sorbose and metabolite group of Sugar and quantification method of LCMS

Leaf Gluconic acid µg/g DW

Compound of Gluconic acid and metabolite group of Cell wall and quantification method of LCMS

Leaf Isocitric acid µg/g DW

Compound of Isocitric acid and metabolite group of tri-Carboxyl acid cycle and quantification method of LCMS

Leaf Glutamic acid µg/g DW

Compound of Glutamic acid and metabolite group of Amino acid and quantification method of LCMS

Leaf Kaempferol-3-O-rutinoside_1 µg/g DW

Compound of Kaempferol-3-O-rutinoside_1 and metabolite group of Phenolic and quantification method of LCMS

Leaf Kaempferol-3-O-rutinoside µg/g DW

Compound of Kaempferol-3-O-rutinoside and metabolite group of Phenolic and quantification method of LCMS

Leaf Tryptophan µg/g DW

Compound of Tryptophan and metabolite group of Amino acid and quantification method of LCMS

Leaf a-Tocopherol µg/g DW

Compound of a-Tocopherol and metabolite group of Isopentenyl pyrophosphate and quantification method of GCMS

Leaf o-Coumaric acid µg/g DW

Compound of o-Coumaric acid and metabolite group of Phenolic and quantification method of LCMS

Leaf Phenylalanine µg/g DW

Compound of Phenylalanine and metabolite group of Amino acid and quantification method of LCMS

Leaf Linoleic acid µg/g DW

Compound of Linoleic acid and metabolite group of Cell wall and quantification method of GCMS

Leaf alpha-Linolenic acid µg/g DW

Compound of alpha-Linolenic acid and metabolite group of Cell wall and quantification method of GCMS

Leaf Palmitic acid µg/g DW

Compound of Palmitic acid and metabolite group of Cell wall and quantification method of GCMS

Leaf Stearic acid µg/g DW

Compound of Stearic acid and metabolite group of Cell wall and quantification method of GCMS

Leaf Cinnamic acid µg/g DW

Compound of Cinnamic acid and metabolite group of Phenolic and quantification method of GCMS

Leaf beta-Carotene µg/g DW

Compound of beta-Carotene and metabolite group of Isopentenyl pyrophosphate and quantification method of UPLC

Leaf Phytoene µg/g DW

Compound of Phytoene and metabolite group of Isopentenyl pyrophosphate and quantification method of UPLC

Leaf Lutein µg/g DW

Compound of Lutein and metabolite group of Isopentenyl pyrophosphate and quantification method of UPLC

Leaf g-Tocopherol µg/g DW

Compound of g-Tocopherol and metabolite group of Isopentenyl pyrophosphate and quantification method of GCMS

Leaf Alanine µg/g DW

Compound of Alanine and metabolite group of Amino acid and quantification method of GCMS

Leaf Aspartic acid µg/g DW

Compound of Aspartic acid and metabolite group of Amino acid and quantification method of GCMS

Leaf Citric acid µg/g DW

Compound of Citric acid and metabolite group of tri-Carboxyl acid cycle and quantification method of GCMS

Leaf Fructose µg/g DW

Compound of Fructose and metabolite group of Sugar and quantification method of GCMS

Leaf Fumaric acid µg/g DW

Compound of Fumaric acid and metabolite group of tri-Carboxyl acid cycle and quantification method of GCMS

Leaf gamma-Amino butyric acid µg/g DW

Compound of gamma-Amino butyric acid and metabolite group of Amino acid and quantification method of GCMS

Leaf Glucose µg/g DW

Compound of Glucose and metabolite group of Sugar and quantification method of GCMS

Leaf Glyceric acid µg/g DW

Compound of Glyceric acid and metabolite group of Cell wall and quantification method of GCMS

Leaf Glycine µg/g DW

Compound of Glycine and metabolite group of Amino acid and quantification method of GCMS

Leaf Inositol µg/g DW

Compound of Inositol and metabolite group of Sugar and quantification method of GCMS

Leaf Isoleucine µg/g DW

Compound of Isoleucine and metabolite group of Amino acid and quantification method of GCMS

Leaf Leucine µg/g DW

Compound of Leucine and metabolite group of Amino acid and quantification method of GCMS

Leaf Malic acid µg/g DW

Compound of Malic acid and metabolite group of tri-Carboxyl acid cycle and quantification method of GCMS

Leaf Mannose µg/g DW

Compound of Mannose and metabolite group of Sugar and quantification method of GCMS

Leaf Sucrose µg/g DW

Compound of Sucrose and metabolite group of Sugar and quantification method of GCMS

Leaf trans-Caffeic acid µg/g DW

Compound of trans-Caffeic acid and metabolite group of Phenolic and quantification method of GCMS

Root Alanine µg/g DW

Compound of Alanine and metabolite group of Amino acid and quantification method of GCMS

Root Aspartic acid µg/g DW

Compound of Aspartic acid and metabolite group of Amino acid and quantification method of GCMS

Root a-Tocopherol µg/g DW

Compound of a-Tocopherol and metabolite group of Isopentenyl pyrophosphate and quantification method of GCMS

Root Palmitic acid µg/g DW

Compound of Palmitic acid and metabolite group of Cell wall and quantification method of GCMS

Root Stearic acid µg/g DW

Compound of Stearic acid and metabolite group of Cell wall and quantification method of GCMS

Root Linoleic acid µg/g DW

Compound of Linoleic acid and metabolite group of Cell wall and quantification method of GCMS

Root Citric acid µg/g DW

Compound of Citric acid and metabolite group of tri-Carboxyl acid cycle and quantification method of GCMS

Root Erythronic acid/Threonic acid µg/g DW

Compound of Erythronic acid/Threonic acid and metabolite group of Cell wall and quantification method of GCMS

Root Fructose µg/g DW

Compound of Fructose and metabolite group of Sugar and quantification method of GCMS

Root Fumaric acid µg/g DW

Compound of Fumaric acid and metabolite group of tri-Carboxyl acid cycle and quantification method of GCMS

Root gamma-Amino butyric acid µg/g DW

Compound of gamma-Amino butyric acid and metabolite group of Amino acid and quantification method of GCMS

Root Glucose µg/g DW

Compound of Glucose and metabolite group of Sugar and quantification method of GCMS

Root g-Tocopherol µg/g DW

Compound of g-Tocopherol and metabolite group of Isopentenyl pyrophosphate and quantification method of GCMS

Root Maleic acid µg/g DW

Compound of Maleic acid and metabolite group of tri-Carboxyl acid cycle and quantification method of GCMS

Root Malic acid µg/g DW

Compound of Malic acid and metabolite group of tri-Carboxyl acid cycle and quantification method of GCMS

Root Mannose µg/g DW

Compound of Mannose and metabolite group of Sugar and quantification method of GCMS

Root Phenylalanine µg/g DW

Compound of Phenylalanine and metabolite group of Amino acid and quantification method of GCMS

Root Arginine µg/g DW

Compound of Arginine and metabolite group of Amino acid and quantification method of LCMS

Root Asparagine µg/g DW

Compound of Asparagine and metabolite group of Amino acid and quantification method of LCMS

Root Glutamic acid µg/g DW

Compound of Glutamic acid and metabolite group of Amino acid and quantification method of LCMS

Root Histidine µg/g DW

Compound of Histidine and metabolite group of Amino acid and quantification method of LCMS

Root Leucine µg/g DW

Compound of Leucine and metabolite group of Amino acid and quantification method of LCMS

Root Proline µg/g DW

Compound of Proline and metabolite group of Amino acid and quantification method of LCMS

Root Quercetin-glucoside malic acid µg/g DW

Compound of Quercetin-glucoside malic acid and metabolite group of Phenolic and quantification method of LCMS

Root Tryptophan µg/g DW

Compound of Tryptophan and metabolite group of Amino acid and quantification method of LCMS

Root Tyrosine µg/g DW

Compound of Tyrosine and metabolite group of Amino acid and quantification method of LCMS

Root Lutein µg/g DW

Compound of Lutein and metabolite group of Isopentenyl pyrophosphate and quantification method of UPLC

Root beta-Carotene µg/g DW

Compound of beta-Carotene and metabolite group of Isopentenyl pyrophosphate and quantification method of UPLC

Root Phytoene µg/g DW

Compound of Phytoene and metabolite group of Isopentenyl pyrophosphate and quantification method of UPLC

Accessions

List of accessions included in the dataset

1. CIP 400103 • Ipomoea batatas (L.) Lam. • Senorita • Traditional cultivar/Landrace • Argentina

PER001 • DOI: N/A

2. CIP 400177 • Ipomoea batatas (L.) Lam. • Aguela Manuchia • Traditional cultivar/Landrace • Bolivia

PER001 • DOI: N/A

3. CIP 400473 • Ipomoea batatas (L.) Lam. • unknown • Traditional cultivar/Landrace • Colombia

PER001 • DOI: N/A

4. CIP 401205 • Ipomoea batatas (L.) Lam. • Unknown • Traditional cultivar/Landrace • Mexico

PER001 • DOI: N/A

5. CIP 401225 • Ipomoea batatas (L.) Lam. • Camote • Traditional cultivar/Landrace • Nicaragua

PER001 • DOI: N/A

6. CIP 401434 • Ipomoea batatas (L.) Lam. • Chaco Morado • Traditional cultivar/Landrace • Venezuela

PER001 • DOI: N/A

7. CIP 401527 • Ipomoea batatas (L.) Lam. • Unknown • Traditional cultivar/Landrace • Ecuador

PER001 • DOI: N/A

8. CIP 420014 • Ipomoea batatas (L.) Lam. • Jonathan • Advanced/improved cultivar • Peru

PER001 • DOI: N/A

9. CIP 420027 • Ipomoea batatas (L.) Lam. • Zapallo • Traditional cultivar/Landrace • Peru

PER001 • DOI: N/A

10. CIP 440001 • Ipomoea batatas (L.) Lam. • Resisto • Advanced/improved cultivar • United States

PER001 • DOI: N/A

11. CIP 440025 • Ipomoea batatas (L.) Lam. • Xushu 18 • Advanced/improved cultivar • China

PER001 • DOI: N/A

12. CIP 440031 • Ipomoea batatas (L.) Lam. • Jewel • Advanced/improved cultivar • United States

PER001 • DOI: N/A

13. CIP 440132 • Ipomoea batatas (L.) Lam. • Beauregard • Advanced/improved cultivar • United States

PER001 • DOI: N/A

14. CIP 440166 • Ipomoea batatas (L.) Lam. • Tanzania • Traditional cultivar/Landrace • Uganda

PER001 • DOI: N/A

15. CIP 440170 • Ipomoea batatas (L.) Lam. • Kemb 37 • Traditional cultivar/Landrace • Kenya

PER001 • DOI: N/A

16. CIP 440175 • Ipomoea batatas (L.) Lam. • AVRDC-CN 1038-16 • Breeding/Research Material • Taiwan

PER001 • DOI: N/A

17. CIP 440252 • Ipomoea batatas (L.) Lam. • Beerwah Gold • Advanced/improved cultivar • Australia

PER001 • DOI: N/A

18. CIP 440262 • Ipomoea batatas (L.) Lam. • Chin Mi (Eun Mi) • Advanced/improved cultivar • South Korea

PER001 • DOI: N/A

19. CIP 440280 • Ipomoea batatas (L.) Lam. • 85002-103 • Traditional cultivar/Landrace • Tonga

PER001 • DOI: N/A

20. CIP 440286 • Ipomoea batatas (L.) Lam. • VSP 1 • Advanced/improved cultivar • Philippines

PER001 • DOI: N/A

21. CIP 440287 • Ipomoea batatas (L.) Lam. • VSP 3 • Advanced/improved cultivar • Philippines

PER001 • DOI: N/A

22. CIP 440290 • Ipomoea batatas (L.) Lam. • Waimanalao • Traditional cultivar/Landrace • Philippines

PER001 • DOI: N/A

23. CIP 441141 • Ipomoea batatas (L.) Lam. • So 83 • Traditional cultivar/Landrace • Solomon Islands

PER001 • DOI: N/A