Подробные сведения о списке дескрипторов

Genesys multi-crop passport descriptors

2017

The Genesys MCDP descriptor list is a specific implementation of the FAO/Bioversity multi-crop passport descriptors V2.1. Key differences are:

  1. Genesys requires DOI instead of any other type of PUID allowed by MCPD v2.1
  2. Inclusion of EC/PGR's Accession URL
  3. Genesys specific descriptors for material availability and allowing for historic records.
Публикатор
Genesys
Версия
2017

FAO WIEWS code of the institute where the accession is maintained. The codes consist of the 3-letter ISO 3166 country code of the country where the institute is located plus a number (e.g. COL001). The current set of institute codes is available from http://www.fao.org/wiews. For those institutes not yet having an FAO Code, or for those with ‘obsolete’ codes, see ‘Common formatting rules (v)’.

Классификация
Дескриптор паспорта
Тип данных
Кодировано

Common name of the crop. Example: 'malting barley’, ’macadamia’, ‘maïs’.

Классификация
Дескриптор паспорта
Тип данных
Произвольный текст

The Digital Object Identifier (DOI) associated with the accession and registered in the portal of the Global Information System (GLIS) of the ITPGRFA. When provided, this single, distinct DOI acts as the primary identifier for the accession.

Example: 10.18730/5N2PQ

Классификация
Дескриптор паспорта
Тип данных
Произвольный текст

This is the unique identifier for accessions within a genebank, and is assigned when a sample is entered into the genebank collection (e.g. ‘PI 113869’).

Классификация
Дескриптор паспорта
Тип данных
Произвольный текст

Either a registered or other designation given to the material received, other than the donor’s accession number (23) or collecting number (3). First letter uppercase. Multiple names are separated by a semicolon without space. Example: Accession name: Bogatyr;Symphony;Emma.

Классификация
Дескриптор паспорта
Тип данных
Произвольный текст

Date on which the accession entered the collection where YYYY is the year, MM is the month and DD is the day. Missing data (MM or DD) should be indicated with hyphens or ‘00’ double zero.

Классификация
Дескриптор паспорта
Тип данных
Дата

Genus name for taxon. Initial uppercase letter required.

Классификация
Дескриптор паспорта
Тип данных
Произвольный текст

Specific epithet portion of the scientific name in lowercase letters. Only the following abbreviation is allowed: ‘sp.’

Классификация
Дескриптор паспорта
Тип данных
Произвольный текст

Provide the authority for the species name.

Классификация
Дескриптор паспорта
Тип данных
Произвольный текст

Subtaxon can be used to store any additional taxonomic identifier. The following abbreviations are allowed: ‘subsp.’ (for subspecies); ‘convar.’ (for convariety); ‘var.’ (for variety); ‘f.’ (for form); ‘Group’ (for ‘cultivar group’).

Классификация
Дескриптор паспорта
Тип данных
Произвольный текст

Provide the subtaxon authority at the most detailed taxonomic level.

Классификация
Дескриптор паспорта
Тип данных
Произвольный текст

The coding scheme proposed can be used at 3 different levels of detail: either by using the general codes (in boldface) such as 100, 200, 300, 400 or by using the more specific codes such as 110, 120 etc.

Классификация
Дескриптор паспорта
Тип данных
Кодировано
КодТерминОписание
100Wild
110Natural
120Semi-natural/wild
130Semi-natural/sown
200Weedy
300Traditional cultivar/landrace
400Breeding/research material
410Breeder's line
411Synthetic population
412Hybrid
413Founder stock/base population
414Inbred line (parent of hybrid cultivar)
415Segregating population
416Clonal selection
420Genetic stock
421Mutant (e.g. induced/insertion mutants, tilling populations)
422Cytogenetic stocks (e.g. chromosome addition/substitution, aneuploids, amphiploids)
423Other genetic stocks (e.g. mapping populations)
500Advanced or improved cultivar (conventional breeding methods)
600GMO (by genetic engineering)
999OtherElaborate in REMARKS field

3-letter ISO 3166-1 code of the country in which the sample was originally collected (e.g. landrace, crop wild relative, farmers’ variety), bred or selected (breeding lines, GMOs, segregating populations, hybrids, modern cultivars, etc.).

Классификация
Дескриптор паспорта
Тип данных
Кодировано

Identifier of the collecting mission used by the Collecting Institute (4 or 4.1) (e.g. ‘CIATFOR-052’, ‘CN426’).

Классификация
Дескриптор паспорта
Тип данных
Произвольный текст

Collecting date of the sample, where YYYY is the year, MM is the month and DD is the day. Missing data (MM or DD) should be indicated with hyphens or ‘00’ double zero.

Классификация
Дескриптор паспорта
Тип данных
Дата

Original identifier assigned by the collector(s) of the sample, normally composed of the name or initials of the collector(s) followed by a number (e.g. ‘FM9909’). This identifier is essential for identifying duplicates held in different collections.

Классификация
Дескриптор паспорта
Тип данных
Произвольный текст

The coding scheme proposed can be used at 2 different levels of detail: either by using the general codes (in boldface) such as 10, 20, 30, 40 or by using the more specific codes such as 11, 12 etc.

Классификация
Дескриптор паспорта
Тип данных
Кодировано
КодТерминОписание
10Wild habitat
11Forest/woodland
12Shrubland
13Grassland
14Desert/tundra
15Aquatic habitat
20Farm or cultivated habitat
21Field
22Orchard
23Backyard, kitchen or home gardenUrban, peri-urban or rural
24Fallow land
25Pasture
26Farm store
27Threshing floor
28Park
30Market or shop
40Institute, Experimental station, Research organization, Genebank
50Seed company
60Weedy, disturbed or ruderal habitat
61Roadside
62Field margin
99OtherElaborate in REMARKS field

FAO WIEWS code of the institute collecting the sample. If the holding institute has collected the material, the collecting institute code (COLLCODE) should be the same as the holding institute code (INSTCODE). Follows INSTCODE standard. Multiple values are separated by a semicolon without space.

Классификация
Дескриптор паспорта
Тип данных
Кодировано

Name of the institute collecting the sample. This descriptor should be used only if COLLCODE cannot be filled because the FAO WIEWS code for this institute is not available. Multiple values are separated by a semicolon without space

Классификация
Дескриптор паспорта
Тип данных
Произвольный текст

Address of the institute collecting the sample. This descriptor should be used only if COLLCODE cannot be filled since the FAO WIEWS code for this institute is not available. Multiple values are separated by a semicolon without space.

Классификация
Дескриптор паспорта
Тип данных
Произвольный текст

Location information below the country level that describes where the accession was collected, preferable in English. This might include the distance in kilometres and direction from the nearest town, village or map grid reference point, (e.g. 7 km south of Curitiba in the state of Parana).

Классификация
Дескриптор паспорта
Тип данных
Произвольный текст

Latitude expressed in decimal degrees. Positive values are North of the Equator; negative values are South of the Equator (e.g. -44.6975).

Классификация
Дескриптор паспорта
Тип данных
Числовая переменная

Longitude expressed in decimal degrees. Positive values are East of the Greenwich Meridian; negative values are West of the Greenwich Meridian (e.g. +120.9123).

Классификация
Дескриптор паспорта
Тип данных
Числовая переменная

Uncertainty associated with the coordinates in metres. Leave the value empty if the uncertainty is unknown.

Классификация
Дескриптор паспорта
Тип данных
Числовая переменная
Единица измерения
m

The geodetic datum or spatial reference system upon which the coordinates given in decimal latitude and decimal longitude are based (e.g. WGS84, ETRS89, NAD83). The GPS uses the WGS84 datum.

Классификация
Дескриптор паспорта
Тип данных
Произвольный текст

The georeferencing method used (GPS, determined from map, gazetteer, or estimated using software). Leave the value empty if georeferencing method is not known.

Классификация
Дескриптор паспорта
Тип данных
Произвольный текст

Elevation of collecting site expressed in metres above sea level. Negative values are allowed.

Классификация
Дескриптор паспорта
Тип данных
Числовая переменная
Единица измерения
m

FAO WIEWS code of the institute that has bred the material. If the holding institute has bred the material, the breeding institute code (BREDCODE) should be the same as the holding institute code (INSTCODE). Follows INSTCODE standard. Multiple values are separated by a semicolon without space.

Классификация
Дескриптор паспорта
Тип данных
Кодировано

Name of the institute (or person) that bred the material. This descriptor should be used only if BREDCODE cannot be filled because the FAO WIEWS code for this institute is not available. Multiple names are separated by a semicolon without space.

Классификация
Дескриптор паспорта
Тип данных
Произвольный текст

FAO WIEWS code of the donor institute. Follows INSTCODE standard

Классификация
Дескриптор паспорта
Тип данных
Кодировано

Name of the donor institute (or person). This descriptor should be used only if DONORCODE cannot be filled because the FAO WIEWS code for this institute is not available.

Классификация
Дескриптор паспорта
Тип данных
Произвольный текст

Identifier assigned to an accession by the donor. Follows ACCENUMB standard.

Классификация
Дескриптор паспорта
Тип данных
Произвольный текст

Information about either pedigree or other description of ancestral information (i.e. parent variety in case of mutant or selection). For example a pedigree 'Hanna/7Atlas//Turk/8Atlas' or a description 'mutation found in Hanna', 'selection from Irene' or 'cross involving amongst others Hanna and Irene'.

Классификация
Дескриптор паспорта
Тип данных
Произвольный текст

Any other identifiers known to exist in other collections for this accession. Use the following format: INSTCODE:ACCENUMB;INSTCODE:identifier;… INSTCODE and identifier are separated by a colon without space. Pairs of INSTCODE and identifier are separated by a semicolon without space. When the institute is not known, the identifier should be preceded by a colon.

Классификация
Дескриптор паспорта
Тип данных
Произвольный текст

FAO WIEWS code of the institute(s) where a safety duplicate of the accession is maintained. Multiple values are separated by a semicolon without space. Follows INSTCODE standard.

Классификация
Дескриптор паспорта
Тип данных
Кодировано

Name of the institute where a safety duplicate of the accession is maintained. Multiple values are separated by a semicolon without space.

Классификация
Дескриптор паспорта
Тип данных
Произвольный текст

If germplasm is maintained under different types of storage, multiple choices are allowed, separated by a semicolon (e.g. 20;30). (Refer to FAO/IPGRI Genebank Standards 1994 for details on storage type.)

Классификация
Дескриптор паспорта
Тип данных
Кодировано
КодТерминОписание
10Seed collection
11Short term
12Medium term
13Long term
20Field collection
30In vitro collection
40Cyropreserved collection
50DNA collection
99OtherElaborate in REMARKS field

The status of an accession with regards to the Multilateral System (MLS) of the International Treaty on Plant Genetic Resources for Food and Agriculture. Leave the value empty if the status is not known

Классификация
Дескриптор паспорта
Тип данных
Кодировано
КодТерминОписание
0NoNot included
1YesIncluded
99OtherElaborate in REMARKS field, e.g. 'under development'

URL linking to additional data about the accession either in the holding genebank or from another source.

Example: http://www.cgn.wageningen-ur.nl/pgr/collections/passdeta.asp?accenumb=CGN04848

Классификация
Дескриптор паспорта
Тип данных
Произвольный текст

The 'historic' flag indicates that the record represents an accession that is no longer maintained by the genebank. The reason may be provided in the 'Remarks' field.

Классификация
Дескриптор паспорта
Тип данных
Да/нет

Genesys allows end-users to request material from genebanks. Accession records marked as "not available for distribution" in Genesys will be excluded from user’s requests. In addition to setting the availability flag, genebanks must opt in to allow end-users to request material through Genesys.

Классификация
Дескриптор паспорта
Тип данных
Да/нет

The remarks field is used to add notes or to elaborate on descriptors with value 99 or 999 (= Other). Prefix remarks with the field name they refer to and a colon (:) without space (e.g. COLLSRC:riverside). Distinct remarks referring to different fields are separated by semicolons without space.

Классификация
Дескриптор паспорта
Тип данных
Произвольный текст