HomepageHomepage
Accession data
Passport data
Subsets and core collections
Characterization and Evaluation datasets
Crop descriptor lists
Directory
Highlighted crops
Provenance of PGRFA
Data providers to Genesys
PGRFA networks in Genesys
Bibliography
Resources
About Genesys
Recent activity
Join Genesys
Citation and attribution
Contact us
Accession documentation
Genesys API
BrAPI
My List
Login
Forgot password
Registration

Virus disease diagnosis for germplasm

2024.1

Diseased samples were collected from the genebank germplasm in the World Vegetable Center field, Tainan HQ, Taiwan. Total RNA or DNA was extracted from the collected samples individually, and virus detection was conducted with PCR or RT-PCR in the virology lab using viral genus degenerate primers of begomovirus, potyvirus, crinivirus, polerovirus, orthotospovirus, and tobamovirus; and species-specific primers of cucumber mosaic virus (CMV).

Partner
WorldVeg World Vegetable Center
Number of accessions
86
Number of traits
1
Start of evaluation
1 September 2022
End of evaluation
30 April 2023
Dataset metadata

Dataset creators

Data collector
Hao-wen Cheng WorldVeg
Data manager
Yan-kuang Chan WorldVeg

Dataset use and licensing

Licensed under
CC0 Public Domain Dedication
More information
https://creativecommons.org/publicdomain/zero/1.0/

Data and resources

Dataset file

Virus disease diagnosis for germplasm_RAWDATA.xlsx

Preview

Dataset metadata

Metadata.xlsx

Preview

MCPD passport data

MCPD - 3cd8edb3-e331-4cda-8932-f0d5251703a6.xlsx

Apply custom filters to accessions in this dataset

Explore dataset accessions on the map

Other Metadata

Date of dataset
Date not provided
Metadata create date
6 June 2024
Metadata updated date
6 June 2024
Published in Genesys
6 June 2024
Locations
Location
Taiwan, Province of China
Date of evaluation
1 September 2022 — 30 April 2023
ISO3 country code
TWN
Traits observed

VirusDetected

PCR or RT-PCR

Accessions

List of accessions included in the dataset

1. VI006616 • Solanum lycopersicum L. • VI006616 • Traditional cultivar/Landrace • India
TWN001 • DOI: N/A
2. VI013898 • Capsicum annuum L. • C02163 • Traditional cultivar/Landrace • India
TWN001 • DOI: N/A
3. VI013901 • Capsicum annuum L. • C02166 • Traditional cultivar/Landrace • India
TWN001 • DOI: N/A
4. VI013902 • Capsicum annuum L. • C02167 • Traditional cultivar/Landrace • India
TWN001 • DOI: N/A
5. VI013908 • Capsicum annuum L. • C02173 • Traditional cultivar/Landrace • India
TWN001 • DOI: N/A
6. VI013937 • Capsicum annuum L. • C02202 • Traditional cultivar/Landrace • India
TWN001 • DOI: N/A
7. VI013939 • Capsicum annuum L. • C02204 • Traditional cultivar/Landrace • India
TWN001 • DOI: N/A
8. VI029220 • Capsicum chinense Jacq. • C04487 • Traditional cultivar/Landrace • Peru
TWN001 • DOI: N/A
9. VI029332 • Capsicum chinense Jacq. • C04598 • Traditional cultivar/Landrace • Ecuador
TWN001 • DOI: N/A
10. VI029366 • Capsicum chinense Jacq. • C04632 • Traditional cultivar/Landrace • Peru
TWN001 • DOI: N/A
11. VI029368 • Capsicum chinense Jacq. • C04634 • Traditional cultivar/Landrace • Peru
TWN001 • DOI: N/A
12. VI029394 • Capsicum chinense Jacq. • C04660 • Traditional cultivar/Landrace • Suriname
TWN001 • DOI: N/A
13. VI030181 • Solanum lycopersicum L. • L05319 • Traditional cultivar/Landrace • China
TWN001 • DOI: N/A
14. VI030186 • Solanum lycopersicum L. • L05324 • Traditional cultivar/Landrace • China
TWN001 • DOI: N/A
15. VI030896 • Solanum lycopersicum L. • BL 481 • Traditional cultivar/Landrace • Thailand
TWN001 • DOI: N/A
16. VI030953 • Solanum lycopersicum L. • L05799 • Traditional cultivar/Landrace • Syria
TWN001 • DOI: N/A
17. VI031205 • Capsicum annuum L. • 53IVT • Traditional cultivar/Landrace • India
TWN001 • DOI: N/A
18. VI031824 • Solanum lycopersicum L. • TL00825 • Traditional cultivar/Landrace • Philippines
TWN001 • DOI: N/A
19. VI031826 • Solanum lycopersicum L. • TL00827 • Traditional cultivar/Landrace • United States of America
TWN001 • DOI: N/A
20. VI031829 • Solanum lycopersicum L. • TL00830 • Traditional cultivar/Landrace
TWN001 • DOI: N/A
21. VI033891 • Phaseolus vulgaris L. • TOT2855 • Traditional cultivar/Landrace • Spain
TWN001 • DOI: N/A
22. VI033893 • Phaseolus vulgaris L. • TOT2857 • Traditional cultivar/Landrace • Spain
TWN001 • DOI: N/A
23. VI033898 • Phaseolus vulgaris L. • TOT2862 • Traditional cultivar/Landrace • Spain
TWN001 • DOI: N/A
24. VI033899 • Phaseolus vulgaris L. • TOT2863 • Traditional cultivar/Landrace • Spain
TWN001 • DOI: N/A
25. VI033901 • Phaseolus vulgaris L. • TOT2865 • Traditional cultivar/Landrace • Spain
TWN001 • DOI: N/A
26. VI034424 • Vigna unguiculata (L.) Walp. subsp. sesquipedalis (L.) Verdc. • SPII COLLECTING PROJECT • Traditional cultivar/Landrace • Malaysia
TWN001 • DOI: N/A
27. VI037239 • Solanum galapagense S. C. Darwin & Peralta • L06036 • Wild • Ecuador
TWN001 • DOI: N/A
28. VI037241 • Solanum galapagense S. C. Darwin & Peralta • L06038 • Wild • Ecuador
TWN001 • DOI: N/A
29. VI037243 • Solanum cheesmaniae (L. Riley) Fosberg • L06040 • Wild • Ecuador
TWN001 • DOI: N/A
30. VI037290 • Solanum pimpinellifolium L. • L06089 • Wild • Peru
TWN001 • DOI: N/A
31. VI037291 • Solanum pimpinellifolium L. • L06090 • Wild • Peru
TWN001 • DOI: N/A
32. VI037339 • Solanum galapagense S. C. Darwin & Peralta • L06146 • Wild • Ecuador
TWN001 • DOI: N/A
33. VI037455 • Capsicum annuum L. • C05686 • Traditional cultivar/Landrace • India
TWN001 • DOI: N/A
34. VI037868 • Solanum galapagense S. C. Darwin & Peralta • LA 1137 • Wild • Ecuador
TWN001 • DOI: N/A
35. VI039844 • Lablab purpureus (L.) Sweet • SPII COLLECTING PROJECT • Traditional cultivar/Landrace • Thailand
TWN001 • DOI: N/A
36. VI040663 • Luffa acutangula (L.) ROXB. • SPII COLLECTING PROJECT • Traditional cultivar/Landrace • Thailand
TWN001 • DOI: N/A
37. VI040813 • Luffa acutangula (L.) ROXB. • SPII COLLECTING PROJECT • Traditional cultivar/Landrace • Thailand
TWN001 • DOI: N/A
38. VI041109 • Luffa aegyptiaca Mill. • SPII COLLECTING PROJECT • Traditional cultivar/Landrace • Thailand
TWN001 • DOI: N/A
39. VI041120 • Luffa aegyptiaca Mill. • SPII COLLECTING PROJECT • Traditional cultivar/Landrace • Thailand
TWN001 • DOI: N/A
40. VI041500 • Solanum habrochaites S. Knapp & D. M. Spooner • TL01359 • Wild • Taiwan ROC
TWN001 • DOI: N/A
41. VI043449 • Capsicum annuum L. • PBC903 • Traditional cultivar/Landrace • India
TWN001 • DOI: N/A
42. VI044167 • Solanum lycopersicum L. • L06098 • Traditional cultivar/Landrace • Philippines
TWN001 • DOI: N/A
43. VI044344 • Capsicum annuum L. • C05573 • Traditional cultivar/Landrace • India
TWN001 • DOI: N/A
44. VI045279 • Capsicum annuum L. • C01902 • Traditional cultivar/Landrace • India
TWN001 • DOI: N/A
45. VI045280 • Capsicum annuum L. • C01906 • Traditional cultivar/Landrace • India
TWN001 • DOI: N/A
46. VI045283 • Capsicum annuum L. • C02687 • Traditional cultivar/Landrace • India
TWN001 • DOI: N/A
47. VI046817 • Capsicum annuum L. • PBC134 • Traditional cultivar/Landrace • India
TWN001 • DOI: N/A
48. VI046915 • Capsicum annuum L. • PBC651 • Traditional cultivar/Landrace • India
TWN001 • DOI: N/A
49. VI047378 • Phaseolus vulgaris L. • TV03833 • Traditional cultivar/Landrace • Vietnam
TWN001 • DOI: N/A
50. VI047410 • Vigna unguiculata (L.) Walp. subsp. sesquipedalis (L.) Verdc. • TV03836 • Traditional cultivar/Landrace • Vietnam
TWN001 • DOI: N/A